Deploy details

6:35:14 PM: Build ready to start

6:35:27 PM: build-image version: 59029cc38debec12b365d8cde2431251b878d6bf (focal)

6:35:27 PM: buildbot version: bb1ad402dcdb036fd1e0d06fdfff977602f794a0

6:35:27 PM: Fetching cached dependencies

6:35:27 PM: Failed to fetch cache, continuing with build

6:35:28 PM: Starting to prepare the repo for build

6:35:28 PM: No cached dependencies found. Cloning fresh repo

6:35:28 PM: git clone --filter=blob:none https://github.com/nf-core/stats

6:35:28 PM: Preparing Git Reference pull/43/head

6:35:30 PM: Starting to install dependencies

6:35:31 PM: mise python@3.13.2 install

6:35:32 PM: mise python@3.13.2 download cpython-3.13.2+20250317-x86_64-unknown-linux-gnu-install_only_stripped.tar.gz

6:35:32 PM: mise python@3.13.2 extract cpython-3.13.2+20250317-x86_64-unknown-linux-gnu-install_only_stripped.tar.gz

6:35:32 PM: mise python@3.13.2 python --version

6:35:32 PM: mise python@3.13.2 Python 3.13.2

6:35:32 PM: mise python@3.13.2 ✓ installed

6:35:32 PM: Python version set to 3.13

6:35:34 PM: Collecting pipenv

6:35:34 PM: Downloading pipenv-2024.4.1-py3-none-any.whl.metadata (17 kB)

6:35:34 PM: Collecting certifi (from pipenv)

6:35:34 PM: Downloading certifi-2025.1.31-py3-none-any.whl.metadata (2.5 kB)

6:35:34 PM: Collecting packaging>=22 (from pipenv)

6:35:34 PM: Downloading packaging-24.2-py3-none-any.whl.metadata (3.2 kB)

6:35:34 PM: Collecting setuptools>=67 (from pipenv)

6:35:34 PM: Downloading setuptools-76.1.0-py3-none-any.whl.metadata (6.7 kB)

6:35:34 PM: Collecting virtualenv>=20.24.2 (from pipenv)

6:35:34 PM: Downloading virtualenv-20.29.3-py3-none-any.whl.metadata (4.5 kB)

6:35:34 PM: Collecting distlib<1,>=0.3.7 (from virtualenv>=20.24.2->pipenv)

6:35:34 PM: Downloading distlib-0.3.9-py2.py3-none-any.whl.metadata (5.2 kB)

6:35:34 PM: Collecting filelock<4,>=3.12.2 (from virtualenv>=20.24.2->pipenv)

6:35:34 PM: Downloading filelock-3.18.0-py3-none-any.whl.metadata (2.9 kB)

6:35:34 PM: Collecting platformdirs<5,>=3.9.1 (from virtualenv>=20.24.2->pipenv)

6:35:34 PM: Downloading platformdirs-4.3.6-py3-none-any.whl.metadata (11 kB)

6:35:34 PM: Downloading pipenv-2024.4.1-py3-none-any.whl (3.0 MB)

6:35:35 PM: ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.0/3.0 MB 39.4 MB/s eta 0:00:00

6:35:35 PM: Downloading packaging-24.2-py3-none-any.whl (65 kB)

6:35:35 PM: Downloading setuptools-76.1.0-py3-none-any.whl (1.2 MB)

6:35:35 PM: ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.2/1.2 MB 49.9 MB/s eta 0:00:00

6:35:35 PM: Downloading virtualenv-20.29.3-py3-none-any.whl (4.3 MB)

6:35:35 PM: ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.3/4.3 MB 117.3 MB/s eta 0:00:00

6:35:35 PM: Downloading certifi-2025.1.31-py3-none-any.whl (166 kB)

6:35:35 PM: Downloading distlib-0.3.9-py2.py3-none-any.whl (468 kB)

6:35:35 PM: Downloading filelock-3.18.0-py3-none-any.whl (16 kB)

6:35:35 PM: Downloading platformdirs-4.3.6-py3-none-any.whl (18 kB)

6:35:35 PM: Installing collected packages: distlib, setuptools, platformdirs, packaging, filelock, certifi, virtualenv, pipenv

6:35:37 PM: Successfully installed certifi-2025.1.31 distlib-0.3.9 filelock-3.18.0 packaging-24.2 pipenv-2024.4.1 platformdirs-4.3.6 setuptools-76.1.0 virtualenv-20.29.3

6:35:37 PM: [notice] A new release of pip is available: 24.3.1 -> 25.0.1

6:35:37 PM: [notice] To update, run: pip install --upgrade pip

6:35:38 PM: Attempting Ruby version 2.7.2, read from environment

6:35:39 PM: Using Ruby version 2.7.2

6:35:39 PM: Started restoring cached go cache

6:35:39 PM: Finished restoring cached go cache

6:35:41 PM: go version go1.19.13 linux/amd64

6:35:42 PM: Using PHP version 8.0

6:35:44 PM: v22.14.0 is already installed.

6:35:45 PM: Now using node v22.14.0 (npm v10.9.2)

6:35:45 PM: Enabling Node.js Corepack

6:35:45 PM: Started restoring cached build plugins

6:35:45 PM: Finished restoring cached build plugins

6:35:45 PM: Started restoring cached corepack dependencies

6:35:45 PM: Finished restoring cached corepack dependencies

6:35:45 PM: No npm workspaces detected

6:35:45 PM: Started restoring cached node modules

6:35:45 PM: Finished restoring cached node modules

6:35:45 PM: Installing npm packages using npm version 10.9.2

6:35:59 PM: added 981 packages in 14s

6:35:59 PM: npm packages installed

6:36:00 PM: Successfully installed dependencies

6:36:00 PM: Starting build script

6:36:01 PM: Detected 0 framework(s)

6:36:01 PM: Section completed: initializing

6:36:03 PM: Netlify Build

6:36:03 PM: ────────────────────────────────────────────────────────────────

6:36:03 PM: ​

6:36:03 PM: ❯ Version

6:36:03 PM: @netlify/build 29.59.2

6:36:03 PM: ​

6:36:03 PM: ❯ Flags

6:36:03 PM: accountId: 5fe99954ee5a2f602bf7a8e7

6:36:03 PM: baseRelDir: true

6:36:03 PM: buildId: 67d9bce2825eee00080ca031

6:36:03 PM: deployId: 67d9bce2825eee00080ca033

6:36:03 PM: ​

6:36:03 PM: ❯ Current directory

6:36:03 PM: /opt/build/repo

6:36:03 PM: ​

6:36:03 PM: ❯ Config file

6:36:03 PM: No config file was defined: using default values.

6:36:03 PM: ​

6:36:03 PM: ❯ Context

6:36:03 PM: deploy-preview

6:36:03 PM: ​

6:36:03 PM: Build command from Netlify app

6:36:03 PM: ────────────────────────────────────────────────────────────────

6:36:03 PM: ​

6:36:03 PM: $ npm run sources && npm run build

6:36:03 PM: > stats@0.0.1 sources

6:36:03 PM: > evidence sources

6:36:04 PM: - Loading plugins & sources

6:36:04 PM: [!] /opt/build/repo/sources/nf-core-statistics is not a valid source (no connection.yaml); skipping

6:36:04 PM: ENOENT: no such file or directory, open '/opt/build/repo/sources/nf-core-statistics/connection.yaml'

6:36:04 PM: ✔ Loading plugins & sources

6:36:04 PM: -----

6:36:04 PM: [Processing] nfcore_db

6:36:07 PM: [!] It looks like Motherduck is taking a bit to connect.

6:36:07 PM: Motherduck connections are only compatible with motherduck >= 0.10.0

6:36:07 PM: Make sure that you have upgraded your instance to at least 0.10.0

6:37:43 PM: all_repos ✖ Error: Invalid Input Error: Initialization function "motherduck_init" from file "/opt/buildhome/.duckdb/extensions/v1.1.3/linux_amd64/motherduck.duckdb_extension" threw an exception: "Initialization function "motherduck_init" from file "/opt/buildhome/.duckdb/extensions/v1.1.3/linux_amd64/motherduck.v1.1.3-2025-01-237.duckdb_extension" threw an exception: "Request failed: (UNAVAILABLE, RPC 'GET_WELCOME_PACK', request id: '8195aa8b-310b-4bc3-9bc4-76a6047cc2e1')""

6:38:30 PM: - Processing...

6:38:31 PM: clone_counts ✔ Finished, wrote 1631 rows.

6:39:00 PM: - Processing...

6:39:00 PM: code_overview ✔ Finished, wrote 1 rows.

6:39:08 PM: - Processing...

6:39:08 PM: community_github_contributors ✔ Finished, wrote 576 rows.

6:39:08 PM: - Processing...

6:39:08 PM: community_github_members ✔ Finished, wrote 1427 rows.

6:39:09 PM: - Processing...

6:39:09 PM: community_overview ✔ Finished, wrote 1 rows.

6:39:19 PM: - Processing...

6:39:19 PM: community_total_gh_contributors ✔ Finished, wrote 1 rows.

6:40:19 PM: community_total_gh_org_members ✖ Error: Invalid Input Error: Initialization function "motherduck_init" from file "/opt/buildhome/.duckdb/extensions/v1.1.3/linux_amd64/motherduck.duckdb_extension" threw an exception: "Initialization function "motherduck_init" from file "/opt/buildhome/.duckdb/extensions/v1.1.3/linux_amd64/motherduck.v1.1.3-2025-01-237.duckdb_extension" threw an exception: "Request failed: (UNAVAILABLE, RPC 'GET_WELCOME_PACK', request id: '8195aa8d-9135-4e27-88fa-c860ab5f38c3')""

6:40:20 PM: - Processing...

6:40:20 PM: gh_contributors ✔ Finished, wrote 439 rows.

6:40:40 PM: - Processing...

6:40:40 PM: pipeline_metrics ✔ Finished, wrote 1631 rows.

6:40:41 PM: - Processing...

6:40:41 PM: slack ✔ Finished, wrote 1420 rows.

6:40:48 PM: - Processing...

6:40:48 PM: slack_users ✔ Finished, wrote 2840 rows.

6:41:48 PM: twitter ✖ Error: Invalid Input Error: Initialization function "motherduck_init" from file "/opt/buildhome/.duckdb/extensions/v1.1.3/linux_amd64/motherduck.duckdb_extension" threw an exception: "Initialization function "motherduck_init" from file "/opt/buildhome/.duckdb/extensions/v1.1.3/linux_amd64/motherduck.v1.1.3-2025-01-237.duckdb_extension" threw an exception: "Request failed: (UNAVAILABLE, RPC 'GET_WELCOME_PACK', request id: '8195aa8e-ec93-40db-9d89-b943d104f9e9')""

6:42:39 PM: - Processing...

6:42:39 PM: view_counts ✔ Finished, wrote 1631 rows.

6:42:39 PM: -----

6:42:39 PM: [Processing] nfcore_issues_stats

6:42:39 PM: - Processing...

6:42:39 PM: gh_commits ✔ Finished, wrote 399 rows.

6:42:39 PM: -----

6:42:39 PM: [Processing] stats_static

6:42:39 PM: - Processing...

6:42:39 PM: core_repos ✔ Finished, wrote 18 rows.

6:42:39 PM: - Processing...

6:42:39 PM: gh_contribs_commits ✔ Finished, wrote 1911 rows.

6:42:39 PM: - Processing...

6:42:39 PM: gh_contribs_commits_and_issues ✔ Finished, wrote 1911 rows.

6:42:39 PM: - Processing...

6:42:39 PM: gh_contribs_issues ✔ Finished, wrote 1911 rows.

6:42:39 PM: - Processing...

6:42:39 PM: github_issue_response_time ✔ Finished, wrote 17 rows.

6:42:39 PM: - Processing...

6:42:39 PM: github_issues ✔ Finished, wrote 201 rows.

6:42:39 PM: - Processing...

6:42:39 PM: github_pr_response_time ✔ Finished, wrote 17 rows.

6:42:39 PM: - Processing...

6:42:39 PM: github_prs ✔ Finished, wrote 1639 rows.

6:42:39 PM: - Processing...

6:42:39 PM: pipeline_numbers ✔ Finished, wrote 149 rows.

6:42:39 PM: - Processing...

6:42:39 PM: pipelines ✔ Finished, wrote 80 rows.

6:42:39 PM: - Processing...

6:42:39 PM: process_contributions ⚠ No results returned.

6:42:39 PM: -----

6:42:39 PM: [INFO]: Evaluated sources, saving manifest

6:42:39 PM: [INFO]: ✅ Done!

6:42:40 PM: > stats@0.0.1 build

6:42:40 PM: > evidence build

6:42:44 PM: [ERROR]: x Build failed in 965ms

6:42:44 PM: error during build:

6:42:45 PM: Failed during stage 'building site': Build script returned non-zero exit code: 2 (https://ntl.fyi/exit-code-2)

6:42:45 PM: Build failed

6:42:45 PM: file:///opt/build/repo/node_modules/@evidence-dev/evidence/cli.js:228

6:42:45 PM: throw `Build process exited with code ${code}`;

6:42:45 PM: ^

6:42:45 PM: Build process exited with code 1

6:42:45 PM: (Use `node --trace-uncaught ...` to show where the exception was thrown)

6:42:45 PM: Node.js v22.14.0

6:42:45 PM: ​

6:42:45 PM: "build.command" failed

6:42:45 PM: ────────────────────────────────────────────────────────────────

6:42:45 PM: ​

6:42:45 PM: Error message

6:42:45 PM: Command failed with exit code 1: npm run sources && npm run build (https://ntl.fyi/exit-code-1)

6:42:45 PM: ​

6:42:45 PM: Error location

6:42:45 PM: In Build command from Netlify app:

6:42:45 PM: npm run sources && npm run build

6:42:45 PM: ​

6:42:45 PM: Resolved config

6:42:45 PM: build:

6:42:45 PM: command: npm run sources && npm run build

6:42:45 PM: commandOrigin: ui

6:42:45 PM: environment:

6:42:45 PM: - EVIDENCE_SOURCE__nfcore_db__database

6:42:45 PM: - EVIDENCE_SOURCE__nfcore_db__token

6:42:45 PM: - REVIEW_ID

6:42:45 PM: publish: /opt/build/repo/build

6:42:45 PM: publishOrigin: ui

6:42:45 PM: Build failed due to a user error: Build script returned non-zero exit code: 2

6:42:45 PM: Failing build: Failed to build site

6:42:45 PM: Finished processing build request in 7m17.921s